PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_34814
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family ERF
Protein Properties Length: 167aa    MW: 18654.1 Da    PI: 8.8913
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_34814genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2591.2e-1863114256
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                 +y+GVr+++ +g+++AeIrd s    + +r++lg+f taeeAa a+++a+ +++g+
  PEQU_34814  63 HYRGVRRRP-WGKFAAEIRDSSR---HgARVWLGTFNTAEEAAVAYDRAAFQMRGA 114
                 7********.**********432...25*************************995 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.7E-3162121IPR001471AP2/ERF domain
SMARTSM003807.2E-3663127IPR001471AP2/ERF domain
PfamPF008473.9E-1463113IPR001471AP2/ERF domain
PROSITE profilePS5103223.45963121IPR001471AP2/ERF domain
SuperFamilySSF541712.35E-2363123IPR016177DNA-binding domain
CDDcd000182.84E-2863121No hitNo description
PRINTSPR003674.0E-116475IPR001471AP2/ERF domain
PRINTSPR003674.0E-1187103IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    Send to blast
MDLSRQQISA DPPQFLPLNE DDSQDMILLQ VLTEASSMSA SSPMSPPTSK KRAEVIGELT  60
KRHYRGVRRR PWGKFAAEIR DSSRHGARVW LGTFNTAEEA AVAYDRAAFQ MRGAKALLNF  120
PPEFVIGGGE LEKEGAGFVE RVGKRKEAEF RDLGADYFGK LMRVYEG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-3062121463ATERF1
3gcc_A2e-3062121463ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010260390.12e-49PREDICTED: pathogenesis-related genes transcriptional activator PTI5-like
SwissprotO046811e-45PTI5_SOLLC; Pathogenesis-related genes transcriptional activator PTI5
TrEMBLA0A0J8BX421e-48A0A0J8BX42_BETVU; Uncharacterized protein
TrEMBLV7BQ202e-48V7BQ20_PHAVU; Uncharacterized protein
STRINGGLYMA15G08560.18e-46(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP10337465
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.12e-25ethylene response factor 1